BAMBE statistics
BAMBE specifications
Information
Unique identifier | OMICS_04243 |
---|---|
Name | BAMBE |
Alternative name | Bayesian Analysis in Molecular Biology and Evolution |
Software type | Package/Module |
Interface | Command line interface |
Restrictions to use | None |
Operating system | Unix/Linux, Windows |
Computer skills | Advanced |
Version | 2.03 |
Stability | Beta |
Maintained | Yes |
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Documentation
- Documentation: http://www.mathcs.duq.edu/larget/bambe/Manual/manual.html
Maintainers
- person_outline BAMBE Team <>
- person_outline Bret Larget <>
- person_outline Donald Simon <>
BAMBE in publications
(3)Differential Genome Evolution Between Companion Symbionts in an Insect Bacterial Symbiosis
[…] major pathways that are absent from b-bgss. these differences include genes for proteins involved in translational machinery (epmab), outer membrane (om) synthesis and integrity (lipoprotein genes bambe and lpp, respectively), a tricarboxylic acid (tca) cycle enzyme (succinyl-coa synthetase β-subunit gene [succ]), and methionine synthesis (metab) and three other putative genes with uncertain […]
[…] jjs and zt supervised the work, contributed to the analyses of the results and to the writing of the paper. all authors read and improved the final manuscript., we thank liudmila abramova, baiba bambe, sam bosanquet, jürgen brandt, philippe de zuttere, christian dolnik, andrea fodor, anna ganeva, irina goldberg, pierre goubet, alessia guggisberg, patxi heras, heike hofmann, adam hölzer, […]
Cloning and characterization of cDNAs encoding putative CTCFs in the mosquitoes, Aedes aegypti and Anopheles gambiae
[…] phylip software package [,]. additionally, a maximum-likelihood tree generated by 200,000 iterations of tree-puzzle [] (data not shown) and a bayesian analysis tree generated by 200,000 cycles of bambe [] with 20,000 cycles of burn-in (data not shown), yielded identical branch topologies., reverse-transcriptase (rt)-pcr amplifications of rna isolated from embryos, ovaries, larvae, pupae […]
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