Base-By-Base pipeline

Base-By-Base specifications

Information


Unique identifier OMICS_03733
Name Base-By-Base
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
License GNU General Public License version 2.0
Computer skills Medium
Version 2.0
Stability Stable
Maintained Yes

Taxon


  • Viruses

Versioning


Add your version

Maintainer


  • person_outline CodonStatistics Team <>

Publications for Base-By-Base

Base-By-Base citation

2008
PMCID: 2397414

[…] of the species, by the program phastcons [39] to make predictions of discrete conserved genomic elements and to produce conservation level scores for each position (base) in the human genome. the base-by-base conservation level scores range from 0 to 1 and represent the posterior probability of every individual position in the genome being in a conserved element. base-by-base conservation […]

Base-By-Base institution(s)
Biochemistry and Microbiology, University of Victoria, Victoria, BC, Canada
Base-By-Base funding source(s)
This work was funded by a Canadian NSERC Discovery grant.

Base-By-Base review

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Brynne Gourlay

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Desktop
I'm using this to compare a few species and so far so good. It has no trouble running on my old and slow computer as well.