Protocols

Basepair specifications

Information


Unique identifier OMICS_28603
Name Basepair
Interface Web user interface
Restrictions to use None
License Commercial
Computer skills Basic
Stability Stable
Registration required Yes
Maintained Yes

Maintainer


  • person_outline Basepair Team

Basepair citation

call_split

ASXL2 is essential for haematopoiesis and acts as a haploinsufficient tumour suppressor in leukemia

2017
Nat Commun
PMCID: 5454368
PMID: 28516957
DOI: 10.1038/ncomms15429
call_split See protocol

[…] ti-RUNX1 and AML1-ETO ChIP-seq were downloaded from the NCBI Gene Expression Omnibus (GEO; http://www.ncbi.nlm.nih.gov/geo/) under accession no. GSE23730 (ref. ).Raw ChIP-seq data were analysed using Basepair software (http://www.basepairtech.com/) with pipelines including the following steps: the raw fastq data were trimmed using trim_galore to remove low-quality ends from reads (quality<15) and […]

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