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Batch Effect Removal

G T A T C G C T A
AltAnalyze
Desktop

AltAnalyze

An easy-to-use application for microarray, RNA-Seq and metabolomics analysis.…

An easy-to-use application for microarray, RNA-Seq and metabolomics analysis. For splicing sensitive platforms (RNA-Seq or Affymetrix Exon, Gene and Junction arrays), AltAnalyze will assess…

G T A T C G C T A
Batch Effect…
Desktop

Batch Effect Removal

Removes systematic batch effects. Batch Effect Removal is a method based on a…

Removes systematic batch effects. Batch Effect Removal is a method based on a residual neural network, trained to minimize the Maximum Mean Discrepancy (MMD) between the multivariate distributions of…

G T A T C G C T A
kBET
Desktop

kBET k-nearest neighbour Batch Effect Test

Quantifies batch effects in single-cell RNA-sequencing (scRNA-seq) data. kBET…

Quantifies batch effects in single-cell RNA-sequencing (scRNA-seq) data. kBET allows users to study high-dimensional data without prior assumptions regarding statistical properties. It can be applied…

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