Unlock your biological data

?

Try: RNA sequencing CRISPR Genomic databases DESeq

1 - 6 of 6 results
filter_list Filters
language Programming Language
healing Disease
settings_input_component Operating System
tv Interface
computer Computer Skill
copyright License
1 - 6 of 6 results
AltAnalyze
An easy-to-use application for microarray, RNA-Seq and metabolomics analysis. For splicing sensitive platforms (RNA-Seq or Affymetrix Exon, Gene and Junction arrays), AltAnalyze will assess alternative exon (known and novel) expression along protein isoforms, domain composition and microRNA targeting. In addition to splicing-sensitive platforms, AltAnalyze provides comprehensive methods for the analysis of other data (RMA summarization, batch-effect removal, QC, statistics, annotation, clustering, network creation, lineage characterization, alternative exon visualization, gene-set enrichment and more).
ascend / Analysis of Single Cell Expression, Normalisation and Differential expression
Allows creation of workflow for the analysis of Single cell RNA sequencing (scRNA-seq) experiments. ascend can handle data generated from any single cell library preparation platform. It includes functions to leverage multiple CPUs, allowing most analyses to be performed on a standard desktop or laptop. In summary, this tool implements a state-of-the-art unsupervised clustering method and integrates established analysis techniques for normalization and differential gene expression.
SAUCIE / Sparse Autoencoder for Unsupervised Clustering, Imputation, and Embedding
Offers a method for handling and extracting structure from single-cell RNA-sequencing and CyTOF data. SAUCIE is a standalone software that provides a deep learning approach developed for the analysis of single-cell data from a cohort of patients. The application is based on different layers able to performs several tasks such as data imputation, clustering, batch correction or visualization. The approach is based on the autoencoder neural network framework for unsupervised learning.
0 - 0 of 0 results
0 - 0 of 0 results

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.