Computational protocol: Diagnostic and prognostic relevance of CP2c and YY1 expression in hepatocellular carcinoma

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Protocol publication

[…] Functional intrinsic disorder propensities of human YY1 (UniProt ID: P25490) and human CP2c (UniProt ID: Q12800) were analyzed by the computational platform D2P2 (http://d2p2.pro/) [], which, in addition to showing disorder predisposition in a query protein by a set of established disorder predictors, such as PONDRĀ® VLXT, IUPred, PONDRĀ® VSL2B, PrDOS, ESpritz, and PV2, represents the location of functional domains, disorder-based binding sites and known sites of posttranslational modifications (PTMs). […]

Pipeline specifications

Software tools IUPred, PrDOS, ESpritz
Databases D2P2
Application Protein structure analysis
Organisms Homo sapiens