Dataset features

Specifications


Dataset type: Expression profiling by high throughput sequencing, Genome binding/occupancy profiling by high throughput sequencing
Number of samples: 4
Release date: Feb 19 2019
Last update date: Feb 20 2019
Access: Public
Dataset link Destabilization of AETFC through C/EBPalpha-mediated repression of LYL1 contributes to t(8;21) leukemic cell differentiation

Experimental Protocol


Since the expression of C/EBPalpha in the AML1-ETO-expressing Kasumi-1 cells is very low, we overexpressed an HA-tagged C/EBPalpha in the cells and performed the ChIP-seq with an anti-HA antibody. We also performed RNA-seq analysis of the C/EBPalpha-overexpressing Kasumi-1 cells and the control cells transduced with the MIGR1 vector.

Repositories


GEO

GSE114642

ENA

SRP148441

BioProject

PRJNA472044

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Contact


Chun-hui Xu