BCALM specifications


Unique identifier OMICS_12164
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input format File input format can be fasta, fastq, either gzipped or not.
Operating system Unix/Linux
Computer skills Advanced
Version 2.0
Stability Stable
Requirements GCC
Maintained Yes


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  • person_outline Rayan Chikhi <>

Publication for BCALM

BCALM institution(s)
CNRS, CRIStAL, Lille, France; ENS Cachan Brittany, Bruz, France; Department of Computer Science and Engineering, The Pennsylvania State University, PA, USA; Department of Biochemistry and Molecular Biology, The Pennsylvania State University, PA, USA; Genome Sciences Institute of the Huck, The Pennsylvania State University, PA, USA
BCALM funding source(s)
This work has been supported in part by NSF awards DBI-1356529, CCF-1439057, IIS-1453527 and IIS-1421908.

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