BCmicrO statistics

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BCmicrO specifications

Information


Unique identifier OMICS_00393
Name BCmicrO
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability No
Maintained No

Publication for BCmicrO

BCmicrO in publications

 (3)
PMCID: 4304206
PMID: 25559987
DOI: 10.1186/1471-2164-15-S10-S2

[…] considered interactions showing that using the intersection of databases was a viable way of interaction filtering., other approaches, such as, comir[], exprtarget[], ranking aggregation[], bcmicro[], genmir3 [] and a bayesian graphical model[], combine the scores of different databases (see table s1 in additional file )., the aim of genmir3 and the bayesian graphical model […]

PMCID: 3629228
PMID: 23613887
DOI: 10.1371/journal.pone.0061622

[…] in the cscs fraction may explain the disrupted signaling pathways in cscs., using a high throughput qpcr approach we identified 26 csc associated differentially expressed mirnas (demirs). using bcmicro algorithm 865 potential csc associated demir targets were obtained. these potential targets were subjected to kegg, biocarta and gene ontology pathway and biological processes analysis. four […]

PMCID: 3610383
PMID: 23573084
DOI: 10.1155/2013/360678

[…] upon identifying all the cernas, the regulation network of cernas of a given goi was constructed., to identify cerna candidates, three mirnas binding prediction algorithms, sitetest, svmicro, and bcmicro, were used in tracrna. sitetest is an algorithm similar to mutame and uses utr features for target prediction. svmicro [] is an algorithm that uses a large number of sequence-level site […]


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BCmicrO institution(s)
Department of Electrical and Computer Engineering, University of Texas at San Antonio, San Antonio, TX, USA

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