BCPREDS statistics

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Citations per year

Number of citations per year for the bioinformatics software tool BCPREDS

Tool usage distribution map

This map represents all the scientific publications referring to BCPREDS per scientific context
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Associated diseases


Popular tool citations

chevron_left Sequence-based B-cell epitope prediction chevron_right
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BCPREDS specifications


Unique identifier OMICS_08223
Interface Web user interface
Restrictions to use None
Input data Primary sequence (amino acid sequence in plain format)
Computer skills Basic
Stability Stable
Maintained Yes


  • person_outline Yasser El-Manzalawy

Publications for BCPREDS

BCPREDS citations


Immune Informatic Analysis and Design of Peptide Vaccine From Multi epitopes Against Corynebacterium pseudotuberculosis

Bioinform Biol Insights
PMCID: 5954444
PMID: 29780242
DOI: 10.1177/1177932218755337
call_split See protocol

[…] le methods (http://www.cbs.dtu.dk/services/BepiPred/). Furthermore, ABCPred, based on learning methods of the machine, applies recurrent neural network (http://www.imtech.res.in/raghava/abcpred), and BCPreds, which are also based on the learning ability of the machine, applies to support vector machines (http://ailab.cs.iastate.edu/bcpreds/) and the Immune Epitope Database and Analysis Resource (I […]


Investigation of immunogenic properties of Hemolin from silkworm, Bombyx mori as carrier protein: an immunoinformatic approach

Sci Rep
PMCID: 5934409
PMID: 29725106
DOI: 10.1038/s41598-018-25374-z

[…] epitope than nonepitope sequence. BCPred method employs subsequence kernel-based SVM classifier. The performance of BCPred (AUC 0.758) outperforms implementation of AAP (AUC 0.7). The cutoff score of BCPreds is >0.8 for prediction of linear B-cell epitopes FBCPred is a novel method developed for prediction of B-cell epitopes with flexible length. B-cell discontinuous epitopes prediction of the hem […]


Autoimmunity to Tropomyosin Specific Peptides Induced by Mycobacterium leprae in Leprosy Patients: Identification of Mimicking Proteins

Front Immunol
PMCID: 5891605
PMID: 29666623
DOI: 10.3389/fimmu.2018.00642

[…] BCPREDS server 1.0 was used (aap prediction method) to identify B cell epitopes of the mimicking proteins. Predicted B cell epitope length was of 20 amino acids and classifier specificity used was 75% […]


Homology modeling and epitope prediction of Der f 33

Braz J Med Biol Res
PMCID: 5875910
PMID: 29561952
DOI: 10.1590/1414-431X20186213
call_split See protocol

[…] ABCpred (), BCPreds (), BcePred (), and Bioinformatics Predicted Antigenic Peptides (BPAP) system () were used for predicting B cell epitopes of Der f 33. ABCpred predicted B cell epitopes in antigen sequences, u […]


Epitope Mapping of Streptococcus agalactiae Elongation Factor Tu Protein Recognized by Human Sera

Front Microbiol
PMCID: 5808131
PMID: 29467739
DOI: 10.3389/fmicb.2018.00125
call_split See protocol

[…] iction: Antibody Epitope Prediction applied methods—Emini Surface Accessibility Prediction (), Kolaskar & Tongaonkar Antigenicity () and Bepipred Linear Epitope Prediction (), as another cross method BCPREDS was used from B-cell epitope prediction server. For more detailed predictions, we used homology models made based on 3D structure of PDB: 2C78 [elongation factor Tu (EF-TU) complexed with a GT […]


Novel Immunoinformatics Approaches to Design Multi epitope Subunit Vaccine for Malaria by Investigating Anopheles Salivary Protein

Sci Rep
PMCID: 5773588
PMID: 29348555
DOI: 10.1038/s41598-018-19456-1
call_split See protocol

[…] B lymphocytes, a type of white blood cells, are the key player of humoral immunity by antibody production. The identification of B-cell epitopes is an essential part in vaccine designing. BCPREDS server was used to predict the linear B-cell epitopes of 20 amino acids long. The amino acid sequence of final vaccine construct was used as an input sequence in plain format followed by the s […]

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BCPREDS institution(s)
Artificial Intelligence Laboratory, Iowa State University, Ames, IA, USA

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