Beacon GRN inference specifications

Information


Unique identifier OMICS_15366
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data The prior known interactions and gene expression data.
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Lenwood Heath <>

Beacon GRN inference article

Beacon GRN inference institution(s)
Department of Computer Science, Virginia Polytechnic Institute and State University, Blacksburg, VA, USA; Genetics, Bioinformatics and Computational Biology, Virginia Polytechnic Institute and State University, Blacksburg, VA, USA; Department of Plant Pathology, Physiology, and Weed Science, Virginia Polytechnic Institute and State University, Blacksburg, VA, USA; Department of Crop and Soil Environmental Sciences, Virginia Polytechnic Institute and State University, Blacksburg, VA, USA
Beacon GRN inference funding source(s)
This work was supported by NSF grant DBI-1062472 and the Genomics, Bioinformatics, and Computational Biology doctoral program at Virginia Tech and by the Virginia Agricultural Experiment Station and the Hatch Program of the NIFA, USDA.

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