Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 21
Release date: Sep 18 2017
Last update date: Nov 28 2018
Access: Public
Diseases: Deficiency Diseases
Computational protocol: MetaPlotR, AME, MEME Suite
Dataset link miCLIP, RNA-Seq, and Ribo-Seq in MOLM13 cells

Experimental Protocol


miCLIP was performed on poly(A) mRNA from MOLM13 as previously described(see GSE63753), RNA-Seq and Ribo-Seq were performed on MOLM13 cells four days after lentiviral transduction with a control shRNA or two independent hairpins targeting METTL3 (shRNA#9 and shRNA#12). All experiments were performed in biological triplicate.

Repositories


GEO

GSE98623

ENA

SRP106608

BioProject

PRJNA385767

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