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Best Alignment Normalization BAN

Applies all the variations in a variant call format (VCF) file to the reference genome to create a sample genome, and then recalls the variants by aligning this sample genome back with the reference genome. BAN is a variant normalisation method for processing VCF files. This method takes into account the equivalency of sets of variants rather than processing each variant individually. Normalisation of VCF files using BAN should provide a much stronger basis for comparing and evaluating variant calling workflows.

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BAN forum

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BAN versioning

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BAN classification

BAN specifications

Software type:
Package/Module
Restrictions to use:
None
Programming languages:
Shell (Bash)
Stability:
Stable
Maintained:
Yes
Interface:
Command line interface
Operating system:
Unix/Linux
Computer skills:
Advanced

BAN support

Documentation

Maintainer

  • Arash Bayat <>

Credits

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Publications

Institution(s)

School of Computer Science and Engineering, University of New South Wales, Sydney, Australia

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