Dataset features

Specifications


Dataset type: Other
Number of samples: 2
Release date: Jun 1 2017
Last update date: Nov 19 2018
Access: Public
Diseases: Alzheimer Disease, Breast Neoplasms
Dataset link Alternative cleavage and polyadenylation analysis in an isoform-resolved way by Second- and Third-Generation Sequencing technologies

Experimental Protocol


Construct expressed isoform and analyze APA events in two human samples with TGS (PacBio) long read and SGS (Illumina) short read data: human embryonic stem cells (H1 cell line, H1-hESC) and brain tissue from a patient with Alzheimer’s disease (Brain-AD).

Repositories


GEO

GSE97688

ENA

SRP103830

BioProject

PRJNA382667

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Contact


Kin Fai Au