Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 16
Release date: Jul 15 2013
Last update date: Nov 14 2017
Access: Public
Dataset link Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates (part 3)

Experimental Protocol


In this sub-series, CLIP and RNAseq data from the hippuristanol treatment experiment are presented. Experiments on 293S cells +/- hippuristanol treatment, in 2 biological replicates. Here, for each treatment/replicate sample, an aliquot was used for RNA-seq, and the rest was split into three aliquots to perform 3 parallel CLIP-seq protocols with different antibodies. So, each RNA-seq dataset here corresponds to 3 CLIP-seq datasets.

Repositories


GEO

GSE44378

ArrayExpress

E-GEOD-44378

ENA

SRP018718

BioProject

PRJNA189782

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