Dataset features

Specifications


Application: DNase-seq analysis, ChIP-seq analysis
Number of samples: 44
Release date: Dec 31 2016
Last update date: Oct 24 2018
Access: Public
Diseases: Neoplasms by Site, Sleep-Wake Transition Disorders
Dataset link Regulatory logic of the coupled diurnal and feeding cycles in the mouse liver [DNase-seq, ChIP-seq]

Experimental Protocol


ChIP-seq of PolII, ChIP-seq of H3K27ac and DNase1-seq in WT C57/B6 and Bmal1KO mouse liver in 12h light-12h dark conditions. Three mice samples pooled every four hours from ZT2 to ZT26. DNase-1 seq done only for ZT 6 in Bmal1KO mice. The wild-type input samples for this study are included in GSE35790 (Samples GSM874971-GSM874977). Contributor: CycliX Consortium

Repositories


GEO

GSE60430

ENA

SRP045509

BioProject

PRJNA258229

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Contact


Jonathan Sobel