BFT statistics

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Citations per year

Number of citations per year for the bioinformatics software tool BFT

Tool usage distribution map

This map represents all the scientific publications referring to BFT per scientific context
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Associated diseases


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BFT specifications


Unique identifier OMICS_12030
Name BFT
Alternative name Bloom Filter Trie
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS
License MIT License
Computer skills Advanced
Version 0.6
Stability Stable
Judy Arrays, Jemalloc
Maintained Yes


No version available



  • person_outline Guillaume Holley

Publication for Bloom Filter Trie

BFT citation


A representation of a compressed de Bruijn graph for pan genome analysis that enables search

PMCID: 4950428
PMID: 27437028
DOI: 10.1186/s13015-016-0083-7

[…] in the string. Therefore, algorithms that construct de Bruijn graphs for assembly (see e.g. [–] and references therein) can not be used for our problem and vice versa.Recently, [] suggested to use a Bloom Filter Trie for pan-genome storage: They use a colored de Bruijn graph, where each stored k-mer has a color, but the condition for an edge is the same as in sequence assembly, i.e., the presence […]

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BFT institution(s)
Genome Informatics, Faculty of Technology, Bielefeld University, Bielefeld, Germany; Center for Biotechnology, Bielefeld University, Bielefeld, Germany; International Research Training Group 1906, Bielefeld University, Bielefeld, Germany
BFT funding source(s)
The International DFG Research Training Group GRK 1906/1

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