BGF statistics

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BGF specifications


Unique identifier OMICS_07779
Name BGF
Alternative name Beijing Gene Finder
Interface Web user interface
Restrictions to use None
Computer skills Basic
Version 1.01
Stability Stable
Maintained Yes


  • person_outline BGF Team <>

Publication for Beijing Gene Finder

BGF in publications

PMCID: 3960121
PMID: 24646527
DOI: 10.1371/journal.pone.0091391

[…] adaptor sequences but no tags), low complexity sequences, and tags with only one copy (potential sequencing errors). a reference database was generated by integrating the indica rice genome (the beijing gene finder, into japonica rice full-length cdnas from the kome (knowledge-based oryza molecular biological encyclopedia) site […]

PMCID: 2612701
PMID: 19038031
DOI: 10.1186/1471-2164-9-565

[…] the method described in [], we selected 5548 cdna verified japonica genes that have homologs in arabidopsis thaliana. we searched out their counterparts in indica and obtained 5502 pairs at last., bgf predicted gene models: we annotated more than 30,000 gene models using bgf [] in two rice genomes and selected 19,775 pairs of alleles with complete structures in well-aligned regions […]

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BGF institution(s)
Beijing Genomics Institute (BGI), Academia Sinica, Beijing, China

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