Bgmix specifications


Unique identifier OMICS_15782
Name Bgmix
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 2.0
Computer skills Advanced
Version 1.40.0
Stability Stable
KernSmooth, R(>=2.3.1)
Maintained Yes



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  • person_outline Alex Lewin <>

Bgmix in publications

PMCID: 4138798
PMID: 25038751
DOI: 10.1038/ng.3042

[…] were compared to the marmoset genome with tblastn algorithm using the tbex script and the locations of marmoset protease genes predicted with bsniffer. putative novel proteases were predicted with bgmix () and visually inspected., snps (7,697,538) in reads aligned to the genome using bwa (version 0.5.9-r16, default parameters), were called using samtools (version 0.1.14 (r933:176), command “$ […]

PMCID: 2998421
PMID: 21151868
DOI: 10.1371/journal.pone.0014161

[…] than the retrograde interference (see , condition background b). surprisingly, performance was not disrupted when textures a and b were presented randomly interleaved trialwise (see , condition bgmix). these results contrast with the present study because, first, learning was not disrupted by sessionwise training, and second, in our previous studies, roving disrupted the learning –. another […]

PMCID: 2865498
PMID: 20359326
DOI: 10.1186/1471-2164-11-220

[…] zebra finch, submitted). protease sequences were found and curated with the bati algorithm (blast, annotate, tune, iterate), using four in-house perl scripts: tbex, blastsniffer, genetuner, and bgmix we started with a previously assembled set including curated human [] and chicken protease sequences. each protein sequence […]

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