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BIG Data Center specifications

Information


Unique identifier OMICS_14135
Name BIG Data Center
Restrictions to use None
Community driven No
Data access Browse
User data submission Not allowed
Maintained Yes

Maintainer


  • person_outline Zhang Zhang

Publication for BIG Data Center

BIG Data Center citations

 (9)
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Effect of Cinnamaldehyde and Citral Combination on Transcriptional Profile, Growth, Oxidative Damage and Patulin Biosynthesis of Penicillium expansum

2018
Front Microbiol
PMCID: 5884930
PMID: 29651282
DOI: 10.3389/fmicb.2018.00597
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[…] enrichment analysis (GOSeq Release2.12) and KEGG pathways analysis (KOBAS v2.0), were carried out based on a previous report (). The RNA-Seq data have been deposited in the Genome Sequence Archive in BIG Data Center, Beijing Institute of Genomics (BIG), Chinese Academy of Sciences, with accession code CRA000582. […]

library_books

Ecological Restoration of Antibiotic Disturbed Gastrointestinal Microbiota in Foregut and Hindgut of Cows

2018
PMCID: 5859144
PMID: 29594071
DOI: 10.3389/fcimb.2018.00079

[…] nd hindgut demonstrated a high sequencing depth in current analysis (Supplementary Figure ). 16S rRNA gene sequencing reads were deposited in the Genome Sequence Archive (http://gsa.big.ac.cn) in the BIG Data Center under accession numbers PRJCA000455. […]

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Functional Analysis of the FZF1 Genes of Saccharomyces uvarum

2018
Front Microbiol
PMCID: 5808186
PMID: 29467731
DOI: 10.3389/fmicb.2018.00096

[…] TruSeq RNA-Seq kits, and RNA-Seq was performed by Nextomics Biosciences Co. Ltd using Illumina HiSeq™. The RNA-Seq data were submitted to the Genome Sequence Archive of Beijing Institute of Genomics (BIG) Data Center (publicly accessible at http://gsa.big.ac.cn, Accession No. PRJCA000414). Transcriptome analysis was performed using DEGseq (Wang et al., ) and DESeq (Anders and Huber, ). […]

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Characterization of Transcription Factor Gene OsDRAP1 Conferring Drought Tolerance in Rice

2018
Front Plant Sci
PMCID: 5799227
PMID: 29449862
DOI: 10.3389/fpls.2018.00094
call_split See protocol

[…] the Rice Genome Annotation Project version 7 (Kawahara et al., ). AgriGO was used to perform GO enrichment analysis (Du et al., ). The raw RNA-seq data are available in the Genome Sequence Archive in BIG Data Center (Beijing Institute of Genomics, Chinese Academy of Sciences) under the accession number PRJCA000683. […]

library_books

Constitutive Expression of miR408 Improves Biomass and Seed Yield in Arabidopsis

2018
Front Plant Sci
PMCID: 5789609
PMID: 29422907
DOI: 10.3389/fpls.2017.02114

[…] ified as differing in expression by at least 1.5-fold (p < 0.01) in the test and control samples. The raw sequence data reported in this paper have been deposited in the Genome Sequence Archive () in BIG Data Center (), Beijing Institute of Genomics (BIG), Chinese Academy of Sciences, under accession number CRA000553 that are publicly accessible at http://bigd.big.ac.cn/gsa. […]

library_books

The 2018 Nucleic Acids Research database issue and the online molecular biology database collection

2017
Nucleic Acids Res
PMCID: 5753253
PMID: 29316735
DOI: 10.1093/nar/gkx1235

[…] .The issue begins with broad surveys of resources at major global centres, including the U.S. National Center for Biotechnology Information (NCBI), the European Bioinformatics Institute (EBI) and the BIG Data Center at the Beijing Institute of Genomics, Chinese Academy of Sciences. The NCBI Resources paper () presents an interesting analysis illustrating the extent of the cross-talk between differ […]

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BIG Data Center institution(s)
BIG Data Center, Beijing Institute of Genomics (BIG), Chinese Academy of Sciences, Beijing, China; CAS Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing, China; University of Chinese Academy of Sciences, Beijing, China
BIG Data Center funding source(s)
Strategic Priority Research Program of the Chinese Academy of Sciences [XDB13040500, XDA08020102]; National Key Research Program of China [2016YFC0901603, 2016YFB0201702, 2016YFC0901903]; National Programs for High Technology Research and Development [2015AA020108]; National Natural Science Foundation of China [31100915, 31200978, 31271386, 31471248]; International Partnership Program of the Chinese Academy of Sciences [153F11KYSB20160008]; Key Program of the Chinese Academy of Sciences [KJZD-EW-L14]; Key Technology Talent Program of the Chinese Academy of Sciences; The 100 Talent Program of the Chinese Academy of Sciences

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