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BiGGR specifications

Information


Unique identifier OMICS_02655
Name BiGGR
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Version 1.16.0
Stability Stable
Requirements
R(>=2.14.0), stringr, rsbml, hyperdraw, LIM, hypergraph, limSolve
Maintained Yes

Versioning


No version available

Documentation


BiGGR citation

library_books

Using Bioconductor Package BiGGR for Metabolic Flux Estimation Based on Gene Expression Changes in Brain

2015
PLoS One
PMCID: 4373785
PMID: 25806817
DOI: 10.1371/journal.pone.0119016

[…] The Bioconductor R package BiGGR facilitates constraint based modeling using metabolic reconstruction databases. Special emphasis was placed on the functionality to query metabolic reconstruction databases for pathways, reactio […]


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