bigSCale statistics

To access cutting-edge analytics on consensus tools, life science contexts and associated fields, you will need to subscribe to our premium service.


Citations per year

Citations chart

Popular tool citations

chevron_left Clustering scRNA-seq data visualization Differential expression detection Normalization Marker gene detection chevron_right
Popular tools chart

Tool usage distribution map

Tool usage distribution map

Associated diseases

Associated diseases

bigSCale specifications


Unique identifier OMICS_22077
Name bigSCale
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages MATLAB, M
Computer skills Advanced
Version 1.0
Stability Stable
Maintained Yes



Add your version


  • person_outline Holger Heyn <>

Publication for bigSCale

bigSCale in publications

PMCID: 5836567
PMID: 29507841
DOI: 10.7717/peerj.4460

[…] were bagre pinnimaculatus, bairdiella ronchus, brotula clarkae, ancylopsetta dendrítica and sphyraena guachancho. only 13 species had an ivi of greater than 50. the most frequent species were the bigscale goatfish, pseudupeneus grandisquamis; speckled flounder, paralichthys woolmani; pacific red snapper, lutjanus peru; and the peruvian mojarra, diapterus peruvianus (); these four species […]

PMCID: 3206028
PMID: 22069464
DOI: 10.1371/journal.pone.0026704

[…] most important fish prey were lanternfishes (myctophids; accounting for 15.7% of total prey weight), of which there were at least nine species, followed by small mouth fishes (nansenia spp.; 9.1%), bigscale fishes (melamphaidae, 6.0%), rattails (macrourids; 5.2%), and various small fishes such as waryfish (scopelosaurus sp.), daggertooths (paralepididae), and viperfish (chauliodus sloani). […]

To access a full list of publications, you will need to upgrade to our premium service.

bigSCale institution(s)
CNAG-CRG, Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology (BIST), Barcelona, Spain; Universitat Pompeu Fabra (UPF), Barcelona, Spain; Centro de Investigación Biomédica en Red de Enfermedades Raras (CIBERER), Madrid, Spain; Hospital del Mar Research Institute (IMIM), Barcelona, Spain
bigSCale funding source(s)
Supported by the Spanish Institute of Health Carlos III (ISCIII); grants from Fundación Ramón Areces; the marathon “Todos Somos Raros, Todos Somos Únicos” (Proyecto 52); and a Marie Skłodowska-Curie Actions fellowship (656359, H2020).

bigSCale reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review bigSCale