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bigSCale specifications


Unique identifier OMICS_22077
Name bigSCale
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages MATLAB, M
Computer skills Advanced
Version 1.0
Stability Stable
Maintained No




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Publication for bigSCale

bigSCale citations


Reproduction and community structure of fish from winter catch sites from industrial shrimp bycatch from the northeast and southeast Mexican Pacific

PMCID: 5836567
PMID: 29507841
DOI: 10.7717/peerj.4460

[…] were bagre pinnimaculatus, bairdiella ronchus, brotula clarkae, ancylopsetta dendrítica and sphyraena guachancho. only 13 species had an ivi of greater than 50. the most frequent species were the bigscale goatfish, pseudupeneus grandisquamis; speckled flounder, paralichthys woolmani; pacific red snapper, lutjanus peru; and the peruvian mojarra, diapterus peruvianus (); these four species […]


Hypotheses of Spatial Stock Structure in Orange Roughy Hoplostethus atlanticus Inferred from Diet, Feeding, Condition, and Reproductive Activity

PMCID: 3206028
PMID: 22069464
DOI: 10.1371/journal.pone.0026704

[…] most important fish prey were lanternfishes (myctophids; accounting for 15.7% of total prey weight), of which there were at least nine species, followed by small mouth fishes (nansenia spp.; 9.1%), bigscale fishes (melamphaidae, 6.0%), rattails (macrourids; 5.2%), and various small fishes such as waryfish (scopelosaurus sp.), daggertooths (paralepididae), and viperfish (chauliodus sloani). […]

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bigSCale institution(s)
CNAG-CRG, Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology (BIST), Barcelona, Spain; Universitat Pompeu Fabra (UPF), Barcelona, Spain; Centro de Investigación Biomédica en Red de Enfermedades Raras (CIBERER), Madrid, Spain; Hospital del Mar Research Institute (IMIM), Barcelona, Spain
bigSCale funding source(s)
Supported by the Spanish Institute of Health Carlos III (ISCIII); grants from Fundación Ramón Areces; the marathon “Todos Somos Raros, Todos Somos Únicos” (Proyecto 52); and a Marie Skłodowska-Curie Actions fellowship (656359, H2020).

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