BINDSURF statistics

To access cutting-edge analytics on consensus tools, life science contexts and associated fields, you will need to subscribe to our premium service.

Subscribe
info

Citations per year

Citations chart
info

Popular tool citations

chevron_left Protein-ligand docking chevron_right
Popular tools chart
info

Tool usage distribution map

Tool usage distribution map
info

Associated diseases

Associated diseases

BINDSURF specifications

Information


Unique identifier OMICS_04912
Name BINDSURF
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


Add your version

Publication for BINDSURF

BINDSURF in publications

 (4)
PMCID: 5795847
PMID: 29391000
DOI: 10.1186/s12906-018-2116-x

[…] level of theory. the optimized structures of ligands (br4 and ba) were saved in pdb format for docking study., several virtual screening tools are available to perform molecular docking such as bindsurf, metadock, lead finder, flexscreen, autodock vina etc. scoring functions implemented in these softwares calculate the protein-ligand interactions energy by computing electrostatic, van der […]

PMCID: 5403970
PMID: 27852201
DOI: 10.2174/1568026616666161117112604

[…] intervention. perez-sanchez and co-workers have developed a similar approach to improve drug discovery using massively parallel gpu hardware instead of supercomputers []. their gpu-based program, bindsurf [], takes advantage of massively parallel and high arithmetic intensity of gpus to speed-up the calculation in low cost desktop machine., in molecular docking, scoring functions are employed […]

PMCID: 4284979
PMID: 25587542
DOI: 10.1155/2014/825649

[…] of volunteer computing to scale bioinformatics applications as an alternative to own large gpu-based local infrastructures. they used as benchmark a gpu-based drug discovery application called bindsurf and the ibercivis, which relies on bioinc, as the reference platform. d. d'agostino et al. in the paper entitled ‚Äúparallel solutions for voxel-based simulations of reaction-diffusion […]

PMCID: 4082831
PMID: 25025055
DOI: 10.1155/2014/474219

[…] of volunteer computing to scale bioinformatics applications as an alternative to own large gpu-based local infrastructures. we use as a benchmark a gpu-based drug discovery application called bindsurf that their computational requirements go beyond a single desktop machine. volunteer computing is presented as a cheap and valid hpc system for those bioinformatics applications that need […]


To access a full list of publications, you will need to upgrade to our premium service.

BINDSURF institution(s)
Computer Engineering Department, School of Computer Science, University of Murcia, Spain

BINDSURF reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review BINDSURF