biobambam specifications

Unique identifier:
OMICS_04664
Alternative name:
biobambam2
Interface:
Command line interface
Input format:
BAM
Programming languages:
C++, Shell (Bash)
Computer skills:
Advanced
Stability:
Stable
Maintained:
Yes
Name:
biobambam
Software type:
Package/Module
Restrictions to use:
None
Operating system:
Unix/Linux, Mac OS
License:
GNU General Public License version 3.0
Version:
2.0.87
Requirements:
libmaus2

Subtools

  • bamsormadup
  • bamcollate2
  • bammarkduplicates
  • bammaskflags
  • bamrecompress
  • bamsort
  • bamtofastq

versioning

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No versioning.

biobambam distribution

download

biobambam support

Documentation

Maintainer

  • German Tischler <>

forum

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Credits

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Publications

Institution(s)

The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK

Funding source(s)

Supported by the Wellcome Trust.

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