Main logo
?

Systems and Synthetic biology software tools and databases

Systems biology is an inter-disciplinary science that studies the complex interactions and the collective behavior of a cell or an organism. Synthetic biology, as a technological subject, combines biological science and engineering, allowing the…

Systems & Synthetic biology applications

Experts in Systems & Synthetic biology

They share and annotate bioinformatics tools

  • Gary Bader's avatar image
    Gary Bader
    Department of Computer Science, University of Toronto, Toronto, Ontario, Canada

Most recent bioinformatics tools

PANDA
Web
Desktop

PANDA Pathway AND Annotation

Allows users to visualize and annotate genes with any data type. PANDA…

Allows users to visualize and annotate genes with any data type. PANDA incorporates gene-level annotation in the context of biological pathways to help interpret complex data from distinct sources…

CCAFS
Algorithm

CCAFS CCA-based feature selection

Allows users to select characteristics from multi-omics data. CCAFS is a…

Allows users to select characteristics from multi-omics data. CCAFS is a multi-view feature selection algorithm that uses the canonical correlation analysis (CCA) learned projective transformation.…

NetEMD
Desktop

NetEMD

Allows identification of common organizational principles in networks. NetEMD…

Allows identification of common organizational principles in networks. NetEMD is a network comparison methodology that can identify similar networks at multiple scales, including when networks differ…

i-Patch
Web

i-Patch

Performs interprotein contact prediction. i-Patch is a suite of novel methods…

Performs interprotein contact prediction. i-Patch is a suite of novel methods that detects interprotein contact sites by considering a protein as a network, with residues as nodes and contacts (both…

Most popular analytical software and databases

CMGRN
Web

CMGRN Constructing Multilevel Gene Regulatory Networks

An integrative web server to unravel hierarchical interactive networks at…

An integrative web server to unravel hierarchical interactive networks at different regulatory levels. The developed method used the Bayesian network modeling to infer causal interrelationships among…

GPS-Prot
Web

GPS-Prot

A software tool that allows users to easily create an integrated human protein…

A software tool that allows users to easily create an integrated human protein network, or HIV-host networks. A major advantage of this platform compared to other visualization tools is its web-based…

ProteinLounge
Web

ProteinLounge

Develops many interactive web-based databases and software to help the…

Develops many interactive web-based databases and software to help the life-scientists understand the complexity of systems biology. Systems biology efforts focus on understanding cellular networks,…

G T A T C G C T A
Geneious
Desktop

Geneious

Proposes a powerful and comprehensive suite of next generation sequencing (NGS)…

Proposes a powerful and comprehensive suite of next generation sequencing (NGS) analysis tools. Through an intuitive and user-friendly interface, Geneious provides visual sequence alignment and…

Related Websites
Information

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.