- Unique identifier:
- Graphical user interface
- Operating system:
- Unix/Linux, Mac OS, Windows
- Eclipse Public License version 1.0
- Software type:
- Restrictions to use:
- Programming languages:
- Computer skills:
- Documentation: http://www.bioclipse.net/documentation
- Ola Spjuth <>
No open topic.
(Spjuth et al., 2007)
Bioclipse: an open source workbench for chemo- and bioinformatics.
PMID: 17316423 DOI: 10.1186/1471-2105-8-59
(Spjuth et al., 2009)
Bioclipse 2: a scriptable integration platform for the life sciences.
PMID: 19958528 DOI: 10.1186/1471-2105-10-397
Department of Pharmaceutical Biosciences, Uppsala University, Uppsala, Sweden; Wellcome Trust Genome Campus, European Bioinformatics Institute, Hinxton, UK; Max von Pettenkofer-Institut, Ludwig-Maximilians-Universität, Munich, Germany
This work was supported by the Swedish VR (04X-05957) and Uppsala University (KoF 07).
1 user review
1 user review
A very helpful graphical platform for working with primarily Cheminformatics data and tasks. It is an impressive piece of software, that brings together disparate open source software in cheminformatics, into an easy to use graphical client.
A lot of mundane tasks like converting between varous chemical formats, generating 3D models from 2D ones etc, can be done by just right-clicking and selecting operations in menus.
There are some minor quirks, such as that the molecular drawing editor takes a little practice to get used to (after that it works fine though), and occasional very long waiting times when accessing update times etc, that draws away the last star. Otherwise, it is definitely a software worth checking out for the working cheminformatician.