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Biographer

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A web-based renderer and editor for reaction networks, which can be integrated as a library into tools dealing with network-related information. Biographer enables visualizations based on the emerging standard Systems Biology Graphical Notation. It is able to import networks encoded in various formats such as SBML, SBGN-ML and jSBGN, a custom lightweight exchange format.

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Biographer classification

Biographer specifications

Interface:
Web user interface
Programming languages:
Javascript
Computer skills:
Basic
Maintained:
Yes
Restrictions to use:
None
License:
GNU Lesser General Public License version 3.0
Stability:
Stable

Biographer support

Maintainer

  • Thomas Handorf <>

Credits

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Publications

Institution(s)

Theoretical Biophysics, Humboldt-Universität zu Berlin, Berlin, Germany; Codecentric AG, Düsseldorf, Germany

Funding source(s)

Google Inc. (Summer of Code); SysMo Translucent 2, ColoNet, e:Bio Cellemental (German Federal Ministry of Science and Education, FKZ: 0315786A, FKZ: 0315417B, FKZ:0316193); and CRC 618 (German Research Foundation)

Link to literature

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