Bioimaging software tools

Few technologies are more widespread in modern biological laboratories than imaging. Recent advances in optical technologies and instrumentation are providing hitherto unimagined capabilities. Almost all these advances have required the development…

Bioimaging applications

Bioimaging software tools

Most Recent Tools

BaSiC
Desktop

BaSiC

Allows image correction and can be applied to high-content images, WSIs (Whole…

Allows image correction and can be applied to high-content images, WSIs (Whole Slide Images) and high-throughput time-lapse movies. BaSiC is a retrospective image correction method for optical…

nat.nblast
Desktop

nat.nblast

Allows to implement NBLAST neuron similarity algorithm. Nat.nblast is an…

Allows to implement NBLAST neuron similarity algorithm. Nat.nblast is an extension of the “nat” software, and supplies a collection of NBLAST-related functions. It executes search of databases…

NAT
Desktop

NAT NeuroAnatomy Toolbox

Allows to realize analysis and visualisation of 3D biological image data, and…

Allows to realize analysis and visualisation of 3D biological image data, and more particularly traced neurons. NAT accepts 3D images in NRRD and 'Amira' AmiraMesh formats. The data can be…

Elmr
Desktop

Elmr

Allows to work with light and electron microscopy (EM) fly brain data. Elmr…

Allows to work with light and electron microscopy (EM) fly brain data. Elmr supplies a solution to move between light level data and adult brain EM. It more particularly emphases on the R…

Most Popular Tools

NeurphologyJ
Desktop

NeurphologyJ

A quantification method capable of automatically quantifying neuronal…

A quantification method capable of automatically quantifying neuronal morphologies such as soma number and size, neurite length, and neurite branching complexity (which is highly related to the…

UMATracker
Desktop

UMATracker

An open-source quantitative analysis toolkit for animal experiments. UMATracker…

An open-source quantitative analysis toolkit for animal experiments. UMATracker provides a video preprocessing by the visual programming and estimates positions and/or orientations of each animals.…

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