Bioimaging software tools

Few technologies are more widespread in modern biological laboratories than imaging. Recent advances in optical technologies and instrumentation are providing hitherto unimagined capabilities. Almost all these advances have required the development…

Bioimaging applications

Most recent bioinformatics tools

ConnectomeExplo…
Desktop

ConnectomeExplorer

Allows users to analyze and explore large volumetric neuroscience data sets.…

Allows users to analyze and explore large volumetric neuroscience data sets. ConnectomeExplorer is based on a powerful query algebra, that can be useful for users in connectomics research to answer…

CVU
Desktop

CVU Connectome Visualization Utility

Allows users to visualize multi-modal human brain networks. CVU generates…

Allows users to visualize multi-modal human brain networks. CVU generates powerful, interactive visualizations of human brain networks from common matrix and imaging file formats. It is decoupled…

Brain Modulyzer
Desktop

Brain Modulyzer

Allows users to explore and analyze modular functional brain connectivity data.…

Allows users to explore and analyze modular functional brain connectivity data. Brain Modulyzer makes possible to apply visualization techniques to all relevant data representations. It uses…

CerebroMatic
Desktop

CerebroMatic

Allows the generation of tissue class priors from infancy to old age.…

Allows the generation of tissue class priors from infancy to old age. CerebroMatic is a toolbox that uses a more flexible statistical approach, namely multivariate adaptive regression splines. It was…

Most popular analytical software

NeurphologyJ
Desktop

NeurphologyJ

A quantification method capable of automatically quantifying neuronal…

A quantification method capable of automatically quantifying neuronal morphologies such as soma number and size, neurite length, and neurite branching complexity (which is highly related to the…

BCT
Desktop

BCT Brain Connectivity Toolbox

A Matlab toolbox for analysis of complex brain networks. The toolbox contains…

A Matlab toolbox for analysis of complex brain networks. The toolbox contains network analysis functions and complex brain network datasets. These measures are increasingly used to characterize…

UMATracker
Desktop

UMATracker

An open-source quantitative analysis toolkit for animal experiments. UMATracker…

An open-source quantitative analysis toolkit for animal experiments. UMATracker provides a video preprocessing by the visual programming and estimates positions and/or orientations of each animals.…

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