Biological network data

Biological network data steps

Most recent bioinformatics tools

PFGD
Dataset

PFGD Phytophthora Functional Genomics Database

Captures heterogeneous data about gene and protein sequences, gene expression…

Captures heterogeneous data about gene and protein sequences, gene expression patterns, biological activity, as well as cellular responses and localization during infection in a useful and intuitive…

PepX
Dataset

PepX Protein-peptide complexes

Provides information about protein-peptide complexes available in the Protein…

Provides information about protein-peptide complexes available in the Protein Data Bank (PDB). PepX concerns protein-peptide complexes with peptide lengths up to 35 residues. It provides an…

PROTCOM
Dataset

PROTCOM Protein Complexes

Supplies user a set of functionalities allowing search, browse, visualization,…

Supplies user a set of functionalities allowing search, browse, visualization, and download of protein complexes. PROTCOM is a database that serves as a pool of templates for threading and homology…

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SYSTOMONAS
Dataset

SYSTOMONAS

Compiles data about the pseudomonas. SYSTOMONAS registers information on eight…

Compiles data about the pseudomonas. SYSTOMONAS registers information on eight different Pseudomonas species and strains, which genomes have been completely sequenced and functionally annotated. The…

Most popular analytical software and databases

BiGG Models
Dataset

BiGG Models

A completely redesigned Biochemical, Genetic and Genomic knowledge base. BiGG…

A completely redesigned Biochemical, Genetic and Genomic knowledge base. BiGG Models contains more than 75 high-quality, manually-curated genome-scale metabolic models. On the website, users can…

NCG
Dataset

NCG Network of Cancer Genes

A manually curated repository of cancer genes derived from the scientific…

A manually curated repository of cancer genes derived from the scientific literature. NCG release 5.0 (August 2015) collects 1571 cancer genes from 175 published studies that describe 188 mutational…

PathCaseMAW
Web

PathCaseMAW PathCase Metabolomics Analysis Workbench

Provides a database-enabled framework and Web-based computational tools for…

Provides a database-enabled framework and Web-based computational tools for browsing, querying, analyzing and visualizing stored metabolic networks. PathCaseMAW is easy to work with by design, and is…

MEMOSys
Dataset

MEMOSys MEtabolic MOdel research and development System

A versatile database for the management, storage and development of…

A versatile database for the management, storage and development of genome-scale models (GEMs). Since its initial release, the database has undergone major improvements, and the new version…

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