BioQRator statistics

To access cutting-edge analytics on consensus tools, life science contexts and associated fields, you will need to subscribe to our premium service.

Subscribe
info

Citations per year

Citations chart
info

Popular tool citations

chevron_left Text annotation chevron_right
Popular tools chart
info

Tool usage distribution map

Tool usage distribution map
info

Associated diseases

Associated diseases

Protocols

To access compelling stats and trends, optimize your time and resources and pinpoint new correlations, you will need to subscribe to our premium service.

Subscribe

BioQRator specifications

Information


Unique identifier OMICS_05236
Name BioQRator
Interface Web user interface
Restrictions to use None
Input data Documents, PubMed abstracts
Input format BioC
Output data Annotated documents
Output format BioC, CSV
Computer skills Basic
Stability Stable
Maintained Yes

Documentation


Maintainer


  • person_outline Sun Kim <>

Publications for BioQRator

BioQRator in pipeline

2015
PMCID: 4674139
PMID: 26650466
DOI: 10.1371/journal.pcbi.1004630

[…] of a given protein using rule-based nlp []. ppinterfinder extracts medline abstracts on human proteins using co-occurrences of protein names, specific keyword dictionary, and pattern matching []. bioqrator can annotate ppi-relevant entity relationships from the biomedical publications []., in this paper, we propose the first, to our knowledge, approach to tm constraints for pp docking. […]


To access a full list of citations, you will need to upgrade to our premium service.

BioQRator in publication

PMCID: 4074764
PMID: 24980129
DOI: 10.1093/database/bau053

[…] or the task may investigate issues not addressed by existing corpora. in either case, several manual annotation tools are available that work in the bioc format. examples include pubtator (, , ) and bioqrator (). pre and post-processing with brat2bioc, the brat (http://brat.nlplab.org) can also be used to create a bioc corpus., a generic evaluation tool would be useful for bioc. an option […]


To access a full list of publications, you will need to upgrade to our premium service.

BioQRator institution(s)
Department of Computer Engineering, Myongji University, Yongin, Korea; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, USA; Department of Biomedical Informatics, Asan Medical Center, Seoul, Korea; Institute for Research in Immunology and Cancer, Université de Montréal, Montréal, Canada

BioQRator reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review BioQRator