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BITOLA specifications


Unique identifier OMICS_06560
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes


  • Primates
    • Homo sapiens

Publication for BITOLA

BITOLA citations


Large Scale Structure of a Network of Co Occurring MeSH Terms: Statistical Analysis of Macroscopic Properties

PLoS One
PMCID: 4090190
PMID: 25006672
DOI: 10.1371/journal.pone.0102188

[…] ding researchers with more relevant and interpretable knowledge. A plethora of applications have been developed exploiting co-occurrence for mining interesting patterns in biomedical resources (e.g., BITOLA , iHOP , AliBaba , EBIMed , FACTA , PLAN2L , STRING , LAITOR ).Analyzing big relational datasets requires innovative methodological approaches beyond the basic exploratory mining. Recent years […]


Candidate Gene Identification for Systemic Lupus Erythematosus Using Network Centrality Measures and Gene Ontology

PLoS One
PMCID: 3847089
PMID: 24312583
DOI: 10.1371/journal.pone.0081766

[…] interpro domains, and gene expression data. ToppGene uses functional annotations, protein interaction networks to prioritize disease specific genes. Different tools like Polysearch , MimMiner , and BITOLA relies on biological data mining. Posmed, a computational based approach prioritizes candidate genes using an inferential process similar to artificial neural network comprising documentrons . […]


Identifying hypothetical genetic influences on complex disease phenotypes

BMC Bioinformatics
PMCID: 2646236
PMID: 19208188
DOI: 10.1186/1471-2105-10-S2-S13

[…] of text features. For instance, POCUS [] uses GO terms together with InterPro domains to find candidate gene interactions; Endeavour [] and NARADA [] use common GO terms to define gene networks; and BITOLA [] uses MeSH terms as concepts that are related to genes by co-occurrence. Other tools that use text mining, such as PDQ Wizard [] use co-occurrence of genes in the literature to infer relation […]


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BITOLA institution(s)
Institute of Biomedical Informatics, Faculty of Medicine, University of Ljubljana, Ljubljana, Slovenia

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