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BiVisu specifications

Information


Unique identifier OMICS_03485
Name BiVisu
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages MATLAB
Computer skills Advanced
Stability Stable
Maintained Yes

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Publication for BiVisu

BiVisu in publications

 (2)
PMCID: 3231811
PMID: 22018164
DOI: 10.1186/1742-4682-8-39

[…] data set genes showing no significant changes were removed., 3. we applied the spectral subtraction denoising algorithm to the dataset []., 4. six biclustering algorithms (isa [], cc [], msbe [], bivisu [], opsm [], samba) and one traditional clustering algorithm (k-means) were applied to the spellman dataset. the total number of biclusters/clusters produced was 683., 5. we ran the greedy […]

PMCID: 2416653
PMID: 18505552
DOI: 10.1186/1471-2105-9-247

[…] when we try to represent several biclusters with this method, again geometrical problems arise because of the large number of lines and the overlapping of several different ones. bicat [] and bivisu [] use parallel coordinates to display single biclusters. however, their representations are limited. bicat does not rearrange bicluster conditions, as it simply marks their corresponding axes […]


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BiVisu institution(s)
Centre for Signal Processing, Department of Electronic and Information Engineering, The Hong Kong Polytechnic University, Hong Kong

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