Blammer statistics

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Associated diseases

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Blammer specifications

Information


Unique identifier OMICS_16826
Name Blammer
Interface Web user interface
Restrictions to use None
Input data A paste from PSI-BLAST.
Input format FASTA, ClustalW
Computer skills Basic
Stability No
Maintained No

Maintainer


This tool is not available anymore.

Blammer in publication

PMCID: 3578206
PMID: 23439773
DOI: 10.3389/fmicb.2013.00027

[…] the blast (altschul et al., ) searches in phylogenie, ncbi blast (version 2.2.19) was used. protein phylogenies were calculated on the basis of full or partial automatic alignments produced by the blammer program included in phylogenie. trees were calculated using raxml (stamatakis et al., ) with the jtt substitution model and 100 bootstrap iterations. all trees were subject of specific […]


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Blammer institution(s)
Department of Protein Evolution, Max Planck Institute for Developmental Biology, Tubingen, Germany; Group for Quantitative and Computational Biology, Max Planck Institute for Biophysical Chemistry, Gottingen, Germany
Blammer funding source(s)
Supported by Institutional funds of the Max Planck Society; German Federal Ministry of Education and Research (BMBF) within the framework of e:Med [e:AtheroSysMed, 01ZX1313A-2014] and e:bio [SysCore].

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