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blastall

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Permits users to run blast searches. blastall permits users to make searching combinations to query nucleotide or peptide sequence databases for example. It is able to find similar sequences in a BLAST database from some given sequences. This tool can perform all five flavours of blast comparison.

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blastall classification

blastall specifications

Software type:
Application/Script
Restrictions to use:
None
Computer skills:
Advanced
Maintained:
Yes
Interface:
Command line interface
Input format:
FASTA
Stability:
Stable

Subtools

  • bl2seq
  • blast2
  • blastcl3
  • blastclust
  • blastpgp
  • copymat
  • fastacmd
  • formatdb
  • formatrpsdb
  • impala
  • makemat
  • megablast
  • rpsblast
  • seedtop
  • taxblast

blastall distribution

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blastall support

Documentation

Link to literature

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