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BLASTGrabber specifications
Information
| Unique identifier | OMICS_22320 |
|---|---|
| Name | BLASTGrabber |
| Software type | Application/Script |
| Interface | Command line interface, Graphical user interface |
| Restrictions to use | None |
| Input format | XML,TXT |
| Output format | CSV,TXT |
| Operating system | Unix/Linux, Mac OS, Windows |
| Programming languages | Java |
| License | Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported License |
| Computer skills | Advanced |
| Version | 2.0 |
| Stability | Stable |
| Requirements |
JRE
|
| Maintained | Yes |
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Documentation
- Documentation: http://folk.uio.no/ralfne/BLASTGrabberUserGuide.pdf
Maintainer
- person_outline Surendra Kumer <>
Publication for BLASTGrabber
library_books
BLASTGrabber: a bioinformatic tool for visualization, analysis and sequence selection of massive BLAST data.
2014 BMC Bioinformatics
PMCID: 4062517
PMID: 24885091
DOI: 10.1186/1471-2105-15-128
BLASTGrabber institution(s)
Section for Genetics and Evolutionary Biology (EVOGENE) and Centre for Epigenetics, Development and Evolution (CEDE), University of Oslo, Oslo, Norway; Department of Clinical Molecular Biology and Laboratory Science (EpiGen), Division of Medicine, Akershus University Hospital, Norway; Centre of Ecological and Evolutionary synthesis, Department of Biosciences, University of Oslo, Oslo, Norway
BLASTGrabber funding source(s)
Supported by a VISTA/Statoil fellowship; PhD fellowships and a starting grant.
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