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DataOnTools #1: A comprehensive data analysis of bioinformatics tools

Ever wondered how many tools are released each year? What country or institute produce the most tool? Or what are the most used programming languages? To answer these burning questions, and a lot more, we are launching a new series of articles, DataOnTools, providing a wide range of data on bioinformatics tools evolution and current status. Most of these data representation will be freely accessible and reusable.   DataOnTools, everything you always wanted to know about bioinformatics tools   Just like the data they are built to analyze, bioinformatics tools are growing at an exponential pace. The origin of bioinformatics tools is well documented and can be traced back to the late 60s. However, documenting the evolution of tools in …

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Explore molecular interactions across cancer types with CancerNet

Cancer is a complex disease characterized by a large number of molecular interaction alterations. Knowledge of molecular interactions is quite useful for discovering the functions of molecules and the processes they are involved in. However, there is little systematic insight into the nature and scale of the potential interactions in human cancers.     To solve this gap, Dr. Ming Chen and his colleagues from the Institute of Bioinformatics in Zhejiang University constructed CancerNet, a database for decoding multilevel molecular interactions across diverse cancer types. Here, they describe the features of CancerNet. The CancerNet database   CancerNet aims to provide cancer-specific molecular interaction networks across multiple cancer types. It includes 33 human cancer types. The interactions contain protein-protein interactions (PPIs), miRNA–target …

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