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BLProt

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Allows the prediction bioluminescence from a protein sequence. BLProt uses a Support Vector Machine (SVM) which is based on physicochemical properties in order to work on bioluminescent proteins. This dataset is evaluated by an independent set of more than 141 bioluminescent proteins and more than 18202 non-bioluminescent proteins.

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BLProt classification

BLProt specifications

Software type:
Application/Script
Restrictions to use:
None
Computer skills:
Advanced
Source code URL:
http://webmail.inb.uni-luebeck.de/inb-toolsdemos/FILES/blprot.rar
Interface:
Command line interface
Operating system:
Unix/Linux
Stability:
Stable
Maintained:
Yes

BLProt distribution

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No versioning.

BLProt support

Maintainer

  • Krishna Kandaswamy <>

Credits

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Publications

Institution(s)

Institute for Neuro- and Bioinformatics, University of Lübeck, Lübeck, Germany; Graduate School for Computing in Medicine and Life Sciences, University of Lübeck, Lübeck, Germany; Bioinformatics Group, Bioscience Core Lab, King Abdullah University of Science and Technology (KAUST), Saudi Arabia; Institute for Signal Processing, University of Lübeck, Lübeck, Germany; Centre for Structural and Cell Biology in Medicine, Institute of Biology, University of Lübeck, Germany

Link to literature

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