BLR specifications


Unique identifier OMICS_30980
Name BLR
Alternative name Barcode-Linked Reads Analysis
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input format FASTQ
Output format FASTQ,BAM
Operating system Unix/Linux
Programming languages Python, Shell (Bash)
Computer skills Advanced
Stability Stable
cutadapt, CD-HIT-454, Bowtie2, Samtools, pigz, mail
Maintained Yes



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  • person_outline Tobias Frick <>

Publication for Barcode-Linked Reads Analysis

BLR institution(s)
Royal Institute of Technology (KTH), School of Engineering Sciences in Chemistry, Biotechnology and Health, Department of Gene Technology, Science for Life Laboratory, Solna, Sweden; Stockholm University, Department of Biochemistry and Biophysics, Science for Life Laboratory, Solna, Sweden
BLR funding source(s)
Supported by the Erling Persson Family Foundation, and Olle Engkvist Foundation [2015/347].

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