BLSSpeller protocols

BLSSpeller specifications

Information


Unique identifier OMICS_09564
Name BLSSpeller
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Java
License GNU General Public License version 2.0
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


Add your version

Maintainer


  • person_outline Dieter De Witte <>

Publication for BLSSpeller

BLSSpeller IN pipeline

2017
PMCID: 5449364
PMID: 28560587
DOI: 10.1186/s12284-017-0164-3

[…] sequence conservation or open chromatin regions. therefore, motif matches were filtered using all 4 sets of conserved non-coding sequences from de witte et al. (http://bioinformatics.intec.ugent.be/blsspeller/) (de witte et al. 2015) and dnasei-hypersensitive sites downloaded from zhang et al. (2012). only the motif matches that overlap by 50% with the above functional regions (open chromatin […]

BLSSpeller institution(s)
Department of Information Technology (INTEC), Ghent University - iMinds; Department of Plant Systems Biology, VIB, Ghent University, Ghent, Belgium; Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium

BLSSpeller reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review BLSSpeller