BM-Map statistics

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Citations per year

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Tool usage distribution map

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Associated diseases

Associated diseases

BM-Map specifications

Information


Unique identifier OMICS_04666
Name BM-Map
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input format SAM
Operating system Unix/Linux, Mac OS, Windows
Programming languages C++
Computer skills Advanced
Version 2.0
Stability Stable
Maintained Yes

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Maintainers


  • person_outline Han Liang <>
  • person_outline Yuan Ji <>

Publication for BM-Map

BM-Map in publications

 (2)
PMCID: 5492445
PMID: 28635623
DOI: 10.3390/s17061454

[…] sparsity matching pursuit (jsmp) [], block-orthogonal matching pursuit (block-omp) [], and orthogonal matching pursuit like algorithm combined with maximum a posteriori based on boltzmann machine (bm-map-omp) []. however, almost none of these existing algorithms consider the intra-block correlation, i.e., the amplitude correlation among the coefficients in each block. in practice, intra-block […]

PMCID: 4713061
PMID: 26766578
DOI: 10.1371/journal.ppat.1005369

[…] authors have declared that no competing interests exist., conceived and designed the experiments: el chd sc ppo. performed the experiments: el chd lw ar cbb pph tw. analyzed the data: el xh chd bm map slkp pph tw sc ag ppo. wrote the paper: el xh sc ppo. established the cohort and managed samples and clinical data used in this study: map ms sa ek wk sl mi ak ejs oa ve lgb jg. provided […]


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BM-Map institution(s)
Graduate Program in Structural & Computational Biology & Molecular Biophysics, Baylor College of Medicine, Houston, TX, USA; Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, TX, USA; Division of Quantitative Sciences, The University of Texas MD Anderson Cancer Center, Houston, TX, USA; Department of Statistics, Rice University, Houston, TX, USA; Department of Biostatistics, The University of Texas MD Anderson Cancer Center, Houston, TX, USA; Department of Statistics, University of Wisconsin - Madison, Madison, WI, USA
BM-Map funding source(s)
Supported by grants from National Institutes of Health CA143883, CA132897 and CA016672, UTMDACC - G. S. Hogan Gastrointestinal Research Fund and the Lorraine Dell Program in Bioinformatics for Personalization of Cancer Medicine.

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