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BML-NMR specifications

Information


Unique identifier OMICS_02855
Name BML-NMR
Alternative name Birmingham Metabolite Library
Restrictions to use None
Maintained Yes

Maintainer


  • person_outline Mark R. Viant

Publication for Birmingham Metabolite Library

BML-NMR citations

 (9)
library_books

Navigating freely available software tools for metabolomics analysis

2017
Metabolomics
PMCID: 5550549
PMID: 28890673
DOI: 10.1007/s11306-017-1242-7

[…] ines are followed (Everett ). Databases that contain NMR spectra from authentic chemical standards of metabolites include Human Metabolome Database (HMDB) (Wishart et al. ), BMRB (Ulrich et al. ) and Birmingham Metabolite Library (BML-NMR) (Ludwig et al. ). However, despite the consistency of chemical shifts, it remains challenging to identify metabolites that are present at only low levels or whi […]

library_books

The early metabolomic response of adipose tissue during acute cold exposure in mice

2017
Sci Rep
PMCID: 5471228
PMID: 28615704
DOI: 10.1038/s41598-017-03108-x

[…] olvents and TMSP, and application of a generalized log transformation. Metabolite assignment and quantification were performed using Chenomx 8 MRS Suite (Chenomx Inc., Edmonton, Alberta, Canada), the Birmingham Metabolite Library, and the Human Metabolome Database. […]

library_books

Improvement of physical, chemical, and biological properties of aridisol from Botswana by the incorporation of torrefied biomass

2016
Sci Rep
PMCID: 4911548
PMID: 27313139
DOI: 10.1038/srep28011

[…] ns. HSQC and 2D-J spectra were further analyzed for annotation of chemical components using SpinAssign (http://prime.psc.riken.jp), Biological Magnetic Resonance Bank (http://www.bmrb.wisc.edu/), and Birmingham Metabolite Library (http://www.bml-nmr.org/).Relaxation time analyses of the water content in soils were measured by solid-state NMR using a Bruker DRX-500 spectrometer operating at 500.13‚ÄČ […]

library_books

Metabolic Biomarker Panels of Response to Fusarium Head Blight Infection in Different Wheat Varieties

2016
PLoS One
PMCID: 4839701
PMID: 27101152
DOI: 10.1371/journal.pone.0153642

[…] [] as provided in TMeV.Metabolite assignment was performed using 2D JRES and TOCSY data. 2D JRES spectra were assigned using database of 2D JRES spectra and automated assignment method provided under Birmingham Metabolite Library []. Assignment of peaks in the TOCSY spectra was performed using Madison Metabolomics Consortium Database and tools []. Total of 60 metabolites were included in analysis […]

library_books

Open Access Metabolomics Databases for Natural Product Research: Present Capabilities and Future Potential

2015
Front Bioeng Biotechnol
PMCID: 4349186
PMID: 25789275
DOI: 10.3389/fbioe.2015.00022

[…] , ) and SDBS (Yamamoto et al., ) are not limited to natural products, but are notable because of the size of their spectral collections, with approximately 51,000 and 29,000 spectra respectively. The BML-NMR database covers only 203 compounds but the spectral depth (16 different one- and two-dimensional experiments for each compound) provides high quality references (Ludwig et al., ). BMRB contain […]

library_books

A New Paradigm for Known Metabolite Identification in Metabonomics/Metabolomics: Metabolite Identification Efficiency

2015
Comput Struct Biotechnol J
PMCID: 4348432
PMID: 25750701
DOI: 10.1016/j.csbj.2015.01.002

[…] ed identification of metabolites but these methods are not yet at the stage that they can be routinely used to identify more than a fraction of the metabolites in complex biofluids such as urine. The Birmingham Metabolite Library (BML) provides a facility for the matching of experimental 2D 1H J-resolved spectra with those of reference metabolites stored in a database, which is a good approach, bu […]

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