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BMRB specifications

Information


Unique identifier OMICS_02858
Name BMRB
Alternative names Biological Magnetic Resonance Bank, BioMagResBank
Restrictions to use None
Community driven No
Data access File download, Browse
User data submission Allowed
Maintained Yes

Maintainers


  • person_outline BMRB Team
  • person_outline Eldon Ulrich

Publication for Biological Magnetic Resonance Bank

library_books

BioMagResBank

2008 Nucleic Acids Res
PMCID: 2238925
PMID: 17984079
DOI: 10.1093/nar/gkm957

BMRB citations

 (316)
library_books

Active Site Gate Dynamics Modulate the Catalytic Activity of the Ubiquitination Enzyme E2 25K

2018
Sci Rep
PMCID: 5934386
PMID: 29725124
DOI: 10.1038/s41598-018-25476-8

[…] buffer exchanged every three days with PBS buffer containing 10 mM freshly dissolved DTT. Chemical shift assignments for E2-25K were accomplished using previous data, and assignments deposited in the BMRB. Assignment ambiguities were resolved through analysis of 3D HNCA, HN(CO)CA, HNCACB, and CBCA(CO)NH experiments–. Assignment of the E2-25K mutants D127G and Q126L were accomplished using a combin […]

library_books

The IL 33 PIN1 IRAK M axis is critical for type 2 immunity in IL 33 induced allergic airway inflammation

2018
Nat Commun
PMCID: 5913134
PMID: 29686383
DOI: 10.1038/s41467-018-03886-6

[…] ndicating that the domain is folded (Fig. ). The backbone (97% complete) and sidechain (85% complete) 13C, 15N and 1H assignments were determined for IRAK-M [1–119:R56D,Y61E] and are deposited at the BioMagResBank (http://www.bmrb.wisc.edu/, accession number 30237). This folded monomeric IRAK-M [1–119:R56D,Y61E] mutant was used for NMR structure determination.Standard three-dimensional NOESY exper […]

library_books

Theoretical and NMR Conformational Studies of β Proline Oligopeptides With Alternating Chirality of Pyrrolidine Units

2018
PMCID: 5883087
PMID: 29644215
DOI: 10.3389/fchem.2018.00091

[…] having the lowest sum of the pairwise RMSD for the remaining structures in the family. Coordinates of atoms, chemical shift assignments and NMR restraints were deposited to BioMagResBank (http://www.bmrb.wisc.edu) under the accession numbers BMRB-21065 (ZZZ- tetrapeptide 1), 21067 (ZZE-tetrapeptide 1), 21066 (ZEZ-tetrapeptide 1), 21064 (EZZ-tetrapeptide 1), 21068 (ZZEZ-pentapeptide 2), and 21069 […]

library_books

Reactive site centric chemoproteomics identifies a distinct class of deubiquitinase enzymes

2018
Nat Commun
PMCID: 5862848
PMID: 29563501
DOI: 10.1038/s41467-018-03511-6

[…] l tertiary di-Ub structures from the RSCB Protein Database was done in Pymol (The PyMOL Molecular Graphics System, Version 1.7.4 Schrödinger, LLC). The sequential assignment of Ub is deposited in the Biological Magnetic Resonance Bank and can be retrieved with the accession number 4769. All samples contained 137 mM NaCl, 10 mM Na2HPO4, 27 mM KCl, and 1.8 mM KH2PO4 adjusted to a pH of 7.2 and conta […]

library_books

A single N‐terminal phosphomimic disrupts TDP‐43 polymerization, phase separation, and RNA splicing

2018
PMCID: 5830921
PMID: 29438978
DOI: 10.15252/embj.201797452

[…] efinement was carried using software Xplor‐NIH (version 2.34) (Schwieters et al, ). The NMR assignments and structure coordinates for TDP‐43 NTD dimer between S48E and Y4R mutants are deposited under BMRB entry number 30345, and PDB ID number 6B1G. […]

library_books

ISCU(M108I) and ISCU(D39V) Differ from Wild Type ISCU in Their Failure To Form Cysteine Desulfurase Complexes Containing Both Frataxin and Ferredoxin

2018
Biochemistry
PMCID: 5842376
PMID: 29406711
DOI: 10.1021/acs.biochem.7b01234

[…] E server was used for the automatic assignment of the backbone signals followed by manual refinements. The assignments of the backbone signals of ISCU(M108I) and ISCU(D39V) have been deposited in the BMRB as entries 27088 and 27089, respectively.To study the interaction between ISCU(M108I) and (NIA)2, a 0.3 mM sample of [U-15N]ISCU(M108I) was placed in a 5 mm Shigemi NMR tube, and 2D 1H–15N TROSY- […]

Citations

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BMRB institution(s)
Department of Biochemistry, University of Wisconsin-Madison, Madison, WI, USA; Institute for Protein Research, Osaka University, Osaka, Japan; The Department of Informatics, University of Athens, Athens, Greece; Department of Computer Sciences, University of Wisconsin-Madison, Madison, WI, USA
BMRB funding source(s)
Supported by National Library of Medicine, National Institutes of Health (LM05799).

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