BNFinder protocols

BNFinder specifications

Information


Unique identifier OMICS_19428
Name BNFinder
Alternative name Bayesian Network Finder
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
License GNU General Public License version 2.0
Computer skills Advanced
Version 2.1.1
Stability Stable
Source code URL https://pypi.org/packages/d3/c9/734e266945a5e708d9fb8a9de61603c548817b380ca96c3c0d1705c2dd55/BNfinder-2.1.1.tar.gz
Maintained Yes

Versioning


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Documentation


Maintainers


  • person_outline Norbert Dojer <>
  • person_outline Bartek Wilczynski <>

Publications for Bayesian Network Finder

BNFinder IN pipeline

2012
PMCID: 3529704
PMID: 22691450
DOI: 10.1186/1752-0509-6-62

[…] functional over-representation, and false discovery rate (fdr) as the multiple hypothesis testing correction scheme., first, we present the results corresponding to p = 0.05. the network obtained by bnfinder+bde has 16 sub-networks each containing at least 3 genes. of these, 6 sub-networks have significantly enriched functionalities (as determined by the go functional enrichment test). […]

BNFinder institution(s)
Institute of Informatics, University of Warsaw, Warsaw, Poland
BNFinder funding source(s)
Supported by Polish Ministry of Science and Higher Education grant [N N301 065236] and Foundation for Polish Science within Homing Plus programme co-financed by the European Union—European Regional Development Fund.

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