BOOGIE specifications

Information


Unique identifier OMICS_12267
Name BOOGIE
Software type Package/Module
Interface Command line interface
Restrictions to use Academic or non-commercial use
Operating system Unix/Linux
Programming languages C++
Computer skills Advanced
Stability Stable
Maintained Yes

Taxon


  • Primates
    • Homo sapiens

Versioning


No version available

Maintainer


  • person_outline Silvio Tosatto

Publication for BOOGIE

BOOGIE citation

library_books

Detailed Characterization of Human Induced Pluripotent Stem Cells Manufactured for Therapeutic Applications

2016
PMCID: 4919381
PMID: 27283945
DOI: 10.1007/s12015-016-9662-8

[…] with the X chromosome from the LiPSC-GR1.1 (male line). This highlights the issues with assignment of sequence data.Extracting Blood type from the whole genome sequencing data was predicted by using BOOGIE for four different blood group systems, namely ABO, MNS, Rh and RhAG (Fig. ). The two cell lines LiPSC-ER2.2 and LiPSC-GR1.1 were distinguished based on their ABO system, showing blood group A […]

BOOGIE institution(s)
Department of Biomedical Sciences, University of Padova, Padova, Italy; Department of Information Engineering, University of Padova, Padova, Italy; Department of Women’s and Children’s Health, University of Padova, Padova, Italy
BOOGIE funding source(s)
This work was also supported by Italian Ministry of Health grant GR-2011-02346845 and FIRB Futuro in Ricerca grant RBFR08ZSXY.

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