BpMatch specifications


Unique identifier OMICS_13971
Name BpMatch
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data DNA sequences
Output data BpMatch outputs the list of the identified segments with their respective position on the target sequence, and the value of a segment mutation distance given by the percentage of uncovered T sequence.
Operating system Unix/Linux, Mac OS, Windows
Programming languages C++
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Maintained Yes



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  • person_outline Claudio Felicioli <>

BpMatch article

BpMatch institution(s)
Noname Research, Pisa, Italy; Department of Computer Science, University of Pisa, Pisa, Italy; Biophysics Institute of the National Research Council of Italy, Pisa, Italy
BpMatch funding source(s)
This work has been partly supported by Italian MIUR grant Italy-Israel FIRB “Pattern Discovery Algorithms in Discrete Structures, with application to Bioinformatics”.

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