BrainMap specifications

Information


Unique identifier OMICS_15476
Name BrainMap
Interface Web user interface
Restrictions to use None
Programming languages Java
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Angela Laird <>

Additional information


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Information


Unique identifier OMICS_15476
Name BrainMap
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


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Maintainer


  • person_outline Angela Laird <>

Additional information


A registration is needed to access to tools.

Publications for BrainMap

BrainMap in publications

 (207)
PMCID: 5911467
PMID: 29713297
DOI: 10.3389/fpsyg.2018.00475

[…] 4.5 × 4.5 voxels = 9 × 9 × 9 mm3) were considered as significant. we identified the bas matching the spm output to the talairach coordinates using the subroutine implemented by matthew brett (http://brainmap.org/index.html)., the choice of assessing brain metabolism in the two subjects by comparing metabolism pre- and post-emdr to a reference group was driven by the lack of statistical […]

PMCID: 5883593
PMID: 29615111
DOI: 10.1186/s13195-018-0366-y

[…] into talairach coordinates, and corresponding gray matter regions and brodmann areas (bas) were identified. correction of mni coordinates to match the talairach coordinates was achieved by using brainmap gingerale 2.3 []. bas were then identified at a range of 0 to 3 mm from the corrected talairach coordinates of the spm output isocenters after importing the corrected coordinates by means […]

PMCID: 5856752
PMID: 29549287
DOI: 10.1038/s41598-018-23051-9

[…] and as a reference, we show an average resting-state activation map, obtained from the ten most reliable components from the 20-dimensional ica analysis [https://www.fmrib.ox.ac.uk/datasets/brainmap+rsns/] of the brainmap database,. in this section, functional connectivity is estimated by the pearson correlation of resting-state fmri time courses between cortical/sub-cortical areas, […]

PMCID: 5837991
PMID: 29545740
DOI: 10.3389/fnins.2018.00120

[…] such as machine learning and artificial intelligence, is not limited by the information processing capacity. recently, studies in neuroscience established brain–function databases, such as brainmap (laird et al., ), brede (nielsen et al., ), sums (dickson et al., ), openfmri (poldrack, ), neurovault (gorgolewski et al., ). all these are automated platforms for data collection, storage, […]

PMCID: 5826940
PMID: 29520240
DOI: 10.3389/fpsyt.2018.00048

[…] as an inventor. mb has equity in soterix medical inc., funding. this work was supported by the national institutes of health under grants r01mh104284, ca137788, mh109289, and mh111896., 1http://www.brainmap.org/icbm2tal/., 2https://www.nimh.nih.gov/research-priorities/rdoc/index.shtml., the supplementary material for this article can be found online […]

BrainMap funding source(s)
This work was supported by grants from the National Institute of Mental Health (R01-MH074457 and R01-MH084812) and the Helmholz Initiative on Systems-Biology “The Human Brain Model”.

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