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RNA splicing branchpoint detection software tools | Genome annotation

Experimental detection of RNA splicing branchpoints, the nucleotide serving as the nucleophile in the first catalytic step of splicing, is difficult. To date, annotations exist for only 16-21% of 3' splice sites in the human genome and even these…
branchpointer
Desktop

branchpointer

Allows users to identify branchpoints throughout the human genome thanks to…

Allows users to identify branchpoints throughout the human genome thanks to gene annotations. Branchpointer generates branchpoint window regions corresponding to annotated exon(s) within a queried…

LaBranchoR
Desktop

LaBranchoR Long short-term memory network Branchpoint Retriever

Provides accurate genome-wide branchpoint annotations. LaBranchoR is a…

Provides accurate genome-wide branchpoint annotations. LaBranchoR is a computational method that disregards noise in the experimental data leading to robust predictions. It helps in the…

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