Breakpointer specifications


Unique identifier OMICS_00308
Name Breakpointer
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input data The file or files containing alignments of single-end reads against a reference genome.
Input format BAM
Output data The predicted regions containing potential breakpoints of SVs.
Output format GFF
Operating system Unix/Linux
Programming languages C++, Perl
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Maintained Yes



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Publication for Breakpointer

Breakpointer institution(s)
Department of Computational Molecular Biology, Max-Planck-Institute for Molecular Genetics, Berlin, Germany
Breakpointer funding source(s)
Supported by Max Planck Society.

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