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|Alternative name||BLAST Ring Image Generator|
|Interface||Graphical user interface|
|Restrictions to use||None|
|Operating system||Unix/Linux, Mac OS, Windows|
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- person_outline Scott A Beatson
Publication for BLAST Ring Image Generator
Two New Lytic Bacteriophages of the Myoviridae Family Against Carbapenem Resistant Acinetobacter baumannii
[…] were identified using tRNAscan-SE (Lowe, ) and ARAGON (Laslett and Canback, ).The comparative genomic analysis between our bacteriophages and those deposited in GenBank was performed using BLASTn and BLAST Ring Image Generator (BRIG) (Alikhan et al., ). The newest proposal of International Committee on Taxonomy of Viruses (ICTV) (https://talk.ictvonline.org/files/ictv_official_taxonomy_updates_sin […]
Heavy Metal Susceptibility of Escherichia coli Isolated from Urine Samples from Sweden, Germany, and Spain
[…] ackages ggplot2 and genoPlotR) (R Foundation for Statistical Computing, Vienna, Austria). The location of the ars operon on the E. coli chromosome was visualized using the BLAST Ring Image Generator (BRIG) (v0.95) (), with the finished chromosome sequence of E. coli MG1655 (GenBank accession number U00096.3) as a reference. […]
Genome comparison of different Zymomonas mobilis strains provides insights on conservation of the evolution
[…] ied for whole chromosome genome comparison and plasmid genome comparison . A circular genomic map for the genomes of 8 Z. mobilis strains genomes were compared using the BLAST Ring Image Generator (BRIG) . […]
Canada Wide Epidemic of emm74 Group A Streptococcus Invasive Disease
[…] hylogenetic trees (1000 bootstrap replications) using SplitsTree4 . Contigs were annotated with Prokka . Recombination was evaluated using BRATNextGen . Genome visualizations were created using BRIG . Detailed bioinformatics methods are presented in the . […]
Infection by a Giant Virus (AaV) Induces Widespread Physiological Reprogramming in Aureococcus anophagefferens CCMP1984 – A Harmful Bloom Algae
[…] by library size. Values from biological replicates at each time point were averaged prior to hierarchical clustering of the viral gene expression. Figure summarizing this data was constructed using BRIG software (). The putative early promoter motif of AaV was detected using MEME () in discriminative mode. The E-values associated with the discovered motifs are a conservative estimate of the numb […]
Mansonella ozzardi mitogenome and pseudogene characterisation provides new perspectives on filarial parasite systematics and CO 1 barcoding
[…] NAs and tRNAs was done using MITOS and Arwen software and validated manually by comparing homologous regions with a Loa loa mitochondria reference in Artemis. A mitogenome map was generated using the BRIG software package. […]
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I'm curious, there was mention about to use BRIG in a command line. But I didn't met any description - in fact only how to start from command line.
A reason I curious is does it possible to install BRIG as a part of web site to generate images based on client's data?