Bisulfite sequencing data analysis software tools

DNA methylation contributes to the epigenetic regulation of many key developmental processes including genomic imprinting, X-inactivation, genome stability and gene regulation. Bisulfite conversion of genomic DNA combined with next-generation sequencing (BS-seq) is widely used to measure the methylation state of a whole genome, the methylome, at single-base resolution (Lister et al., 2009; Bock et al., 2010; Harris et al., 2010).

Data preprocessing

Data processing

Data analysis

Data visualization

Integrative analysis

Workflows

File manipulation

Utilities

Unclassified tools