BTMORPH specifications

Information


Unique identifier OMICS_31315
Name BTMORPH
Software type Framework/Library
Interface Command line interface
Restrictions to use None
Input data A representation of a neuronal morphology.
Input format SWC
Operating system Unix/Linux, Mac OS, Windows
Programming languages Python
Computer skills Advanced
Stability Stable
Requirements
numpydoc, sphinx, numpy, scipy, matplotlib
Maintained Yes

Download


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Versioning


No version available

Maintainer


  • person_outline Benjamin Torben-Nielsen

Additional information


http://btmorph.readthedocs.io/en/latest/#

Publication for BTMORPH

BTMORPH citation

library_books

REMOD: A Tool for Analyzing and Remodeling the Dendritic Architecture of Neural Cells

2016
Front Neuroanat
PMCID: 4701929
PMID: 26778971
DOI: 10.3389/fnana.2015.00156

[…] roper functioning of the nervous system have developed and provided the community with commercial and freeware tools such as Neurolucida Explorer (Glaser and Glaser, ), L-Measure (Scorcioni et al., ) BTMORPH (Torben-Nielsen, ), and NLMorphologyViewer to trace, analyze and visualize the shape of the reconstructed neurons. However, most of these tools need to be locally installed and often require a […]

BTMORPH institution(s)
Computational Neuroscience Unit, Okinawa Institute of Science and Technology Graduate University, Okinawa, Japan

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